Computational Genomics

Genome Databases

Doug Brutlag

September 26, 2007

  • Slides (HTML)
  • Slides (PDF)
  • Literature References
  • Genome Web Resources
    • National Center for Biotechnology Information
    • Genomic Biology @ NCBI
    • Entrez Genome @ NCBI
    • Entrez Genome Projects @NCBI
    • Entrez Genes @ NCBI
    • Human Genome @ NCBI
    • Entrez all Databases @ NCBI

    • European Bioinformatics Institute
    • Genome Databases @ EBI
    • Genome Reviews @ EBI
    • ENSEMBL Genomes @ EBI
    • Human Genome @ EBI
    • ENCODE Resources @ EBI

    • UC Santa Cruz Human Genome Browser Project
    • Human Genome Browser @ UCSC
    • ENCODE Project @ UCSC
    • BLAT Genome Search @ UCSC
    • Gene Sorter @ UCSC

    • Other Resources
    • Human Genome Database @ GDB
    • HUGO Gene Nomenclature Database
    • DNA Database of Japan @ DDBJ
    • Gene Ontology Database
    • TIGR = J. Craig Venter Institute
    • TIGR Comprehensive Microbial Resource
    • IMG JGI Integrated Microbial Genomes

  • Literature Web Resources
    • PubMed @ NCBI
    • Stanford University Libraries
    • Stanford Proxy Service
    • Lane Medical Library
    • Lane Bioresearch Portal
    • Google Scholar
    • HighWire Press
    • EndNote X1

** Last Updated September 25, 2007**